ExperienceSource on GitHub
July 2024 – August 2024
Multiple sequence alignment
F(i, j)=maxF(i − 1, j − 1) + s(xi, yj)F(i − 1, j) + s(xi, −)F(i, j − 1) + s(−, yj)
01/Unaligned
Five DNA reads, still ragged — no gaps, no shared columns yet.
A
ATGGTCAAGCTAGGCTAGCTAT
B
ATTCAAGCTAGGCTAGCT
C
GGTCAAGCTAGGCTAGATTA
D
ATGGTGGGGATTATTAAGCTAT
E
GCTAGGGGGATTA